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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791242.1_cds_XP_016506141.1_1865
CDS Infomation

[gene=LOC107823928] [db_xref=GeneID:107823928] [protein=histone deacetylase 9 isoform X2] [protein_id=XP_016506141.1] [location=join(46132..46168,46261..46373,46464..46581,47119..47193,47268..47487,48392..48455,49985..50077,50164..50272,50408..50457,50541..50631,51748..51818,52278..52376,52512..52601)] [gbkey=CDS]
Sequence

ATGCGGTCCAAGGACAAAATCTCCTACTTCTACGACGGCGATGTCGGAAGCGTGTACTTC
GGTCCGAACCATCCAATGAAGCCGCACAGGTTGTGTATGACTCATCATCTGGTTTTAGCC
TATGGTCTTCACAACAAGATGGAAGTCTATAGGCCTCATAAAGCATACCCAGTGGAGCTA
GCGCAGTTTCATTCAGCTGATTATGTTGAGTTCTTGAACCGAATTACCCCTGATACCCAG
CACTTGTTCCCTAGTGAAATGGCTAGATATAATCTTGGAGAAGATTGCCCTGTATTTGAC
AACTTATTCGAGTTTTGCCAAATTTATGCTGGCGGAACAATAGATGCTGCACGCAGATTG
AATAATCAGCTTTGTGACATTGCTATAAATTGGGCTGGTGGATTGCATCATGCCAAGAAA
TGTGCTGCTTCAGGATTTTGCTATATAAATGACCTAGTTCTGGGAATATTGGAGCTACTG
AAGTATCATGCGAGGGTGCTGTATATTGATATTGATGTGCATCACGGTGATGGTGTAGAA
GAGGCCTTTTATTTCACTGACAGGGTTATGACAGTTAGTTTCCACAAGTATGGAGATAAG
TTCTTTCCTGGAACTGGTGATATGAAGGATACAGGGGAAAGAGATGGAAGATTCTATTCC
ATAAATGTGCCCCTCAAGGATGGAATAGATGATGGCATCTTCACTAGACTCTTCAAAACA
ATTATTGCAAAGGTTGTGGAAACATATTCACCTGGTGCGATAGTTCTGCAATGTGGGGCA
GATTCACTAGCTGGTGATCGTCTGGGCTGCTTCAACCTCTCCATTGATGGGCATGCTGAA
TGCGTAAGGTTTGTGAAGAAATTTAATTTGCCGTTGCTGGTAACTGGAGGTGGGGGATAC
ACAAAAGAGAACGTTGCCCGATGTTGGGCACTGGAAACTGGAGTTCTTTTAGACACAGAA
CTTCCCAATGAAATTCCAGATAATGATTACATCAAATATTTTGGCCCTGATTATTCATTG
AAGCTTCCTGGCGGGCACATAGAGAACTTGAATAGCAAATCATACATTGGCACCATAAAA
ATGCAAGTAATGGAAAATCTTCGTTGCATCCAGCATGCTCCTGGTGTACAAATGCAAGAA
TTAAAAGGTTGTTTATTGTCGGTTTTTGTTCGGATTGCCGTGGCATTGCACTTGAGATAC
ATTTTGCCCTTGAAAGTGATTGCCTCTTGA

Peptide Sequence

PEP ID

XP_016506141.1
PEP Infomation

PREDICTED: histone deacetylase 9 isoform X2 [Nicotiana tabacum]
Sequence

MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHNKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPDTQHLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGIFTRLFKT
IIAKVVETYSPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFGPDYSLKLPGGHIENLNSKSYIGTIK
MQVMENLRCIQHAPGVQMQELKGCLLSVFVRIAVALHLRYILPLKVIAS

Transcript Sequence

Gene sequence data has not been registered.